YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|113972029, gi...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.97
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MANINLLPWR EEAREKQKRD YIGILAAVFL GSAVLVYVAL SLLDMMTDEQ RGRNAYLQSE  60
   61 IQQLDAQIAE IKKITERKKD IERRTEIILN LQQSRNLPTH VLDELVRIVP PGIYLSSLEK 120
  121 KGSLLLIEGR SESNNNVANM MRKVKASEWL TDPNMQSIVT QDDELRQLQR FSLRVSIKGA 180
  181 MADEPIKTAK GASK

Type	Start	End	Confidence
Cytoplasmic	1	20	0.97
Transmembrane Helix	21	41	0.97
Non-Cytoplasmic	42	194	0.98