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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|113972135, gi...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.84
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQSGSSARGR QSAHGPFRVI LVFSLLVLAI ATASRIGLGL WQGERVAAVD GWSHLLLQGI  60
   61 RVDIATLCWL WGVAALGTAL FSGDHLLGRV WQWVLRLWLT LGLWAIVFLE VSTPAFIEEY 120
  121 GIRPNRLYVE YLIYPKEVLS MLWAGRKLEL IFSVLLSIVT LWGGWKLSGK LSKNLRFPRW 180
  181 YWRPVLAVMV IVVTLLGARS TLGHRPINPA MVAFADDPLV NSLVINSAYS LVFAIKQMGS 240
  241 EEDASKVYGS LDKDEIIKTI RQESGRPETA FTSNEVPSLS FNQASYSGKP KNLVILLQES 300
  301 LGARFVGSLG GMPLTPNIDA LSQEGWYFDN LYATGTRSVR GIEAVTTGFT PTPARAVVKL 360
  361 GKSQTGFFTL AELLKNHGYT TQFIYGGESH FDNMRSFFLG NGFSDIIDQK DYQSPAFVGS 420
  421 WGASDEDLMR KANSEFERLH SEGKPFFSLV FSSSNHDPFE FPDGRIELYE QPKQTRNNAA 480
  481 KYADYAIGEF FKLAKNADYW KDTIFIVVAD HDSRVGGADL VPVPRFRIPG LILGDNVAPK 540
  541 RDHRIVSQID LPPTLLSLIG ISDSYPMLGR DLTQVSEDWP GRALMQYDKN FALMEGKDVV 600
  601 ILQPEKAAQG FQYDEKTEHL TPYAPAAQAL EKKALGWALW GSLAYQQELY RSGK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle