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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|113884560, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFNNKTLLAL AISSVCGFAH AADNLIISEY VEGSSNNKAI ELYNPTANTL DLSQYQLRFY  60
   61 FNGSTNVGTT IALNGTLAAG ATYVVADNDA SADILAVTNQ QSSASFFNGD DAIVLTYQDQ 120
  121 VIDSLGQVGV DPGSEWGSSD LSTQDNTLRR NPDQLIADTI IDDAVTFNTW LGFAKDDISD 180
  181 LGKFSVGTPT DPVEPPPSSL ACGEASTPIH ALQGSTNVSP LNGQTLVVEA IVVSNQEAGL 240
  241 KGIFVQMADN EADNDPQTSE GVFVYTGNAP TGYVAGDRVR LKAKVTEYQG LTELTTVADH 300
  301 KLCAAGQTLP TAAVVTLPVN SSDDFEPFEG MRVRFSQDLV VNEVYNLGRY GEISLGSSRH 360
  361 FIGTQVAAPG ADALAVTAAN LKDSILLDDG LTAQNPDPVI FPAPGLSASN TVRVGDKATS 420
  421 LTGVMHYGFN LYRIMPTEPV NFVAENPRPQ SPELAEGGNL KVASFNVLNY FNGDGQGGGF 480
  481 PTSRGANTLS EFERQKAKIV SAMVGISADV FGLMEIENDG FGANSAIADL VAGLNAAVGE 540
  541 NRYAYVIPKV NGSNLSAIGT DAITVGLIYR SDKVSPQGDA RILSSANSPL DDAGQPQFDD 600
  601 SKNRPMLTQA FALNGSEESV VVAVNHLKSK GSECAGDPDM NDGQGNCNIT RTRAATAAGQ 660
  661 WIAAQYPEQG VLLIGDLNSY AKEDPLSALA NAGFSELFAK LEKANPYSYV FSGESGQLDH 720
  721 ALANAALVDK VLDVTEWHIN TDEPRVLDYN EEFKTAAQVQ DLYASDAYRS SDHDPVVISL 780
  781 LLEAENLAPE ASFTQVVNGA SVQFTSTSTD SDGQIVSTEW DFGDNTQTMG EAVSHTYAQT 840
  841 GDYLVTLTVT DNDGLSHSSS QMVSVVVENV KKPPVAQIQH INLWLVDMFI STSYDTDGVI 900
  901 KQHKWKFDNG SRASGPVVFR PARRGLHTVE LTVKDNDKLT DTTSLTFR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle