YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|82495888, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.87
Topology Confidence:	0.83
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIKRSPTKQR GVALIVVLLI VAMVVIIATN ITSRNQLSMR RTLNLAQYDQ AYWYAISAEE  60
   61 LAKKILKQDL DDSEGRVHKQ QYWAMSDVVF PAEYGEIAGK ITDMRSCFNL NALSVTTKDV 120
  121 ENGQPKLPLA AKQYKALLVS LGMDDFTADH LTQTLKDYID EDTVASPYGA EDAEYEARNV 180
  181 PYRAANTLMN HRSELRAVIG YTQDIYLKLL PYICVIPGND RQLLNVNTIE VEQAALLAAM 240
  241 LDNQISVGEA ESIINQRPGD GFAKIDDFYE SSSMGSIKWE DAMKSSFVVD SQYFLLASGA 300
  301 KVDNAIFRME SVLKKSSGNK MDVLTRQFGG QK

Type	Start	End	Confidence
Cytoplasmic	1	10	0.84
Transmembrane Helix	11	31	0.83
Non-Cytoplasmic	32	332	0.99