YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|82406257, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.71
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDHFSALPIF VTVVECGSFS AAGQKLGLSK SAISKRITQL EQHLGIQLLQ RTTRSLSLTD  60
   61 AGARYFEYIR PAVQLTQEGL DAISELQQTP KGNLRISVPM VFGRLYIAPL IAEFLKRYPD 120
  121 IQLQMQMDDK TTDLIAGGFD LAIRIGELPD SSLITRKIAP CLSVICASPA YLAQHGSPMV 180
  181 PRELTQHNCL FYSYFQDGVE WSFQSPNGMQ RIQPKGNYQV NNSDAIHRAC LDGLGIANLP 240
  241 LFIVESDLQA GRLQTILTNF LLPEHGIYAV YPQRKYLPTK VKVLIDFLRD KLANTD

Type	Start	End	Confidence
Signal Peptide	1	20	0.71
N-region	1	11
H-region	12	17
C-region	18	20
Cleavage Site	20	21
Non-Cytoplasmic	21	296	0.96