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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|82495436, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.20
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDMDSFPESF NSSKSVYASV ISSSWLMLLA AIFFMGISWY VLEEYLRDRG EERFNNNVQD  60
   61 LIGAVSSRMS AYAQVLRGGV GLFLASDGVT RHEWQLYVSN ARLSEYYPGI QGLGFAQLLT 120
  121 PATLDAFTRE VQQEGVVDYR VAPSGNRELY CAIKYLEPFD WRNQRALGFD MCSESTRRTA 180
  181 ILHAIATGFP TASGKVTLVQ ETPDDTQAGI LMYAPLYHGQ PITEEERKQQ AIGVVYAPFR 240
  241 MNDLMQGIMG KRFSGLKLAI YDGIEANKDT LMFTSHTALP SADDVFYQSQ LETMEGQVWR 300
  301 LEVSSESRFI SSSEQTQSIW LQVIGSAFIL VLFYSVLTMA RNRYQESRLT AELIANEKRF 360
  361 RLVIEASPSA LFMVDRAGII TLVNTHAERL FGYARDELLG RSINMLLPEA LRDVHQQHMG 420
  421 NYLVQPIAKN MSLRDDLFGC CKDGTRLAIE VGLTPIHFSN GVSILATINN VSERKRIEAQ 480
  481 RIEHTAELER INKELDQFAY IASHDLKSPL RGIEQLTNWL SEDLAENTDE NVQKYLGLIQ 540
  541 SRIQRMVLLL DGLLMFSRIG RVDAERVEVD SRQLIEDMFA LVAPPQGFSL ALEGNFPRFK 600
  601 TVKTLLELVI RNLISNAIKH HDKGEGVIKV ICETSNHHYW FSVIDDGPGI SSRFHGKVFQ 660
  661 MFQTLRPRDE VEGSGLGLSL VKKTVESLGG KIQLESEGRG CCFRFSWPMH IVNKEGI

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle