YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|82495315, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.87
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MISRIFGYFE EGVLNLLITL MTLLVFTEVV ARFFFNTGFL WIQELTLTLC GWFVLFGMSY  60
   61 GVKVGAHIGV DAFVKNLPPK AKKVTSLVTA LICLAYCGLF LKGSWEYLSQ MYQIGVPMED 120
  121 IHFPKFLLNS LDPDFAWNTL KIDVEDGAVP IWLSQSILLI GFSMLTWRFF ELFIAILRNQ 180
  181 VSGFQFADEA KESMHLIDEA AQHAQQETDN KEAK

Type	Start	End	Confidence
Cytoplasmic	1	11	0.94
Transmembrane Helix	12	35	0.87
Non-Cytoplasmic	36	44	0.72
Transmembrane Helix	45	64	0.89
Cytoplasmic	65	83	0.86
Transmembrane Helix	84	105	0.90
Non-Cytoplasmic	106	150	0.94
Transmembrane Helix	151	170	0.90
Cytoplasmic	171	214	0.95