YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|113886489, gi...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.90
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRSLSAKRMA RSKRGFTLVE MVTVILILGI LVVGVSSFII FGTRIFVESS SVDQVLSQSR  60
   61 FAVERMTREL RSALPNSVRL NGNGLTYQCV EFVPIEASTT YLSMPIAPSA AALTGTVILN 120
  121 ATDNIKDNQY IWIYPLTDSD VYNSARQKRA QIKTFTPLGE SPNPANQVTL TFMASTRFAE 180
  181 ASPRQRIYFG SSPVSYCFEK SSSSNELILK RYTGYGLNVS QPTPSSMSAG VLMAQNVANA 240
  241 LNDSADLPLI LTPSSLVNNA MVHLQPRFNV NGETFQYRHQ VQVINVP

Type	Start	End	Confidence
Cytoplasmic	1	20	0.90
Transmembrane Helix	21	42	0.95
Non-Cytoplasmic	43	287	0.95