YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	LBD6_MAIZE
Protein type:	Globular with Signal Peptide
Type Confidence:	0.93
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASSVPAPSG SVITVASSSS SAAAAAVCGT GSPCAACKFL RRKCQPDCVF APYFPPDNPQ  60
   61 KFVHVHRVFG ASNVTKLLNE LHPFQREDAV NSLAYEADMR LRDPVYGCVG VISILQHNLR 120
  121 QLQQDLARAK YELSKYQAAA AASASTAPTG PQAMAEFIGN AMPNGAHNFI NIGHSAALGS 180
  181 LGGSASVFGQ EQFGNAQMLS RSYDGGEPIA RLGINGGGYE FGYSTAMGGS GAVSGLGTLG 240
  241 ISPFLKSGTA GGDEKPNGGQ

Type	Start	End	Confidence
Signal Peptide	1	25	0.97
N-region	1	16
H-region	17	22
C-region	23	25
Cleavage Site	25	26
Non-Cytoplasmic	26	260	0.97