YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	vma9
Protein type:	Transmembrane
Type Confidence:	0.73
Topology Confidence:	0.32
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGGLVVLLVG LLTALMSVVS YYVSPKGNNT STWQMSLILT FSCCYLLWAI TYLAQLHPLE  60
   61 APSRVLE

Type	Start	End	Confidence
Cytoplasmic	1	4	0.32
Transmembrane Helix	5	24	0.68
Non-Cytoplasmic	25	32	0.58
Transmembrane Helix	33	56	0.68
Cytoplasmic	57	67	0.43