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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: UXS1_DANRE
Protein type: Transmembrane
Type Confidence: 0.73
Topology Confidence: 0.68
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMRMSWMVTV INRRMMKILI ALALIAYIAS VWGTYANMRS IQEHGEMKIE QRIDEAVGPL  60
   61 REKIRELELS FTQKYPPVKF LSEKDRKRIL ITGGAGFVGS HLTDKLMMDG HEVTVVDNFF 120
  121 TGRKRNVEHW IGHENFELIN HDVVEPLYIE VDQIYHLASP ASPPNYMYNP IKTLKTNTIG 180
  181 TLNMLGLAKR VGARLLLAST SEVYGDPEVH PQNEDYWGHV NPIGPRACYD EGKRVAETMC 240
  241 YAYMKQEGVE VRVARIFNTF GSRMHMNDGR VVSNFILQAL QGEALTVYGS GSQTRAFQYV 300
  301 SDLVNGLVSL MNSNISSPVN LGNPEEHTIL EFAQLIKSLV ASRSHIQFLP EAQDDPQRRR 360
  361 PDIRKAKLLL GWEPVVPLEE GLNKTIQYFS RELEHQANNQ YIPKPKAARM KKGRPRHN

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle