YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	UPPP_RUEPO
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.74
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSLFHLILVA LIQGITEFLP VSSSGHLILL PALTGLEDQG QVIDVAVHVG TLGAVVLYFW  60
   61 RDVRDGLAGL PRALTGRLDT PGARLAMGLI VATIPTVLAG AALHFTGLSD ALRSITVIGW 120
  121 TMLLFGLLLW WADRTGAQVK EATDWSLRDA LILGLWQAVA LIPGTSRSGI TITGARAMGY 180
  181 TRSDGARISM LMSIPTIIAS GVLLGADVAV TSDAQAARDG AIAAAFAFVS ALLALSLMMR 240
  241 LLRSVSFTPY VIYRLALGLV LLGIAYS

Type	Start	End	Confidence
Cytoplasmic	1	6	0.83
Transmembrane Helix	7	30	0.82
Non-Cytoplasmic	31	41	0.73
Transmembrane Helix	42	61	0.87
Cytoplasmic	62	81	0.81
Transmembrane Helix	82	104	0.92
Non-Cytoplasmic	105	110	0.73
Transmembrane Helix	111	132	0.90
Cytoplasmic	133	187	0.69
Transmembrane Helix	188	210	0.86
Non-Cytoplasmic	211	219	0.62
Transmembrane Helix	220	239	0.93
Cytoplasmic	240	249	0.54
Transmembrane Helix	250	266	0.89
Non-Cytoplasmic	267	267	0.74