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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: ZDH22_ARATH
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.83
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSEIEVVEE IQSNPKENGE SSSKGIEEES LKNDVYTAAA YGDLEKLHRL VECEGSSVSE  60
   61 PDALGYYALQ WSALNNRVAV AQYLIEHGGD VNATDHTGQT ALHWSAVRGA IQVAELLLQE 120
  121 GARVDATDMY GYQATHVAAQ YGQTAFLCHV VSKWNADPDV PDNDGRSPLH WAAYKGFADS 180
  181 IRLLLFLDAY RGRQDKEGCT PLHWAAIRGN LEACTVLVQA GKKEDLMITD KTGLTPAQLA 240
  241 AEKNHRQVSF FLGNARSLLE KRCDGSSPLG RLSKLGLAPV LWIMILLLLL VYTNSVVLAS 300
  301 NLPKLTTGIG ALAWLGFILA TAGLFLFYRC SRKDPGYIRM NIHDPQTMKD DEPLLKIELN 360
  361 NPALLAGNWT QLCATCKIIR PLRAKHCSTC DRCVEQFDHH CPWVSNCVGK KNKWEFFLFL 420
  421 LLEVLAMLIT GGVTLARVLS DPSAPSSFGA WMSHVASNHV GALSFLLVEF CLFFSVAVLT 480
  481 VIQASQISRN ITTNEMANAL RYSYLRGPGG RFRNPYDLGC RRNCSDFLVK GYNEDIECHE 540
  541 EDATQRPEGI SMMQMQRNPN LQNGNGHVAI DVNPTHNSQS AHVHSANCSH SHNSKSKSDN 600
  601 VPLGLGLGLS RNPTRPVVSP 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle