YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	TIM21_BOVIN
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.95
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MICTLLRAVR CTERLHGCPG KPWFLPHSVP HRACSQTEPR WRWGLQEQNT TARPRCIWGV  60
   61 TQRSIWTQVR SPQSAKEDGS KQVSVHRSQG GETVLSTSQK VKEAGRDFTY LIVVLIGISI 120
  121 TGGLFYTIFR ELFSSSSPNK IYGKALEKCR SHPEVISVFG EPVKGYGEVT RRGRRQLVSF 180
  181 IEYKKDGLKH MRVKFYIQGS EPGKQGTVHL EVKENPESGE YEFRYIFVEL EPYSRTIVVE 240
  241 DNRS

Type	Start	End	Confidence
Cytoplasmic	1	107	0.98
Transmembrane Helix	108	129	0.95
Non-Cytoplasmic	130	244	0.99