YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	Syb-PC
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.95
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MENNEAPSPS GSNNNDFPIL PPPPNANDNY NQFGDHQIRN NNAAQKKLQQ TQAKVDEVVG  60
   61 IMRVNVEKVL ERDQKLSELG ERADQLEQGA SQFEQQAGKL KRKQWWANMK MMIILGVIAV 120
  121 VLLIIVLVSV WPSSSDSGSG GGNKAITQAP PH

Type	Start	End	Confidence
Cytoplasmic	1	110	0.99
Transmembrane Helix	111	131	0.95
Non-Cytoplasmic	132	152	0.96