YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	SUMF2_BOVIN
Protein type:	Globular with Signal Peptide
Type Confidence:	0.98
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGISLSPLLT VLSLLSGRWL ELGNGQTVNM VQLPGGRFQM GTDSPDGRDG EGPVREVTVK  60
   61 PFAIDIFPVT NKDFREFVRE KKYRTEAEVF GWSFVFEDLV SDELRNKATQ RMQSLLWWLP 120
  121 VERAFWRQPA GPGSGIREKL EFPVVHVSWN DARAYCAWRG KRLPTEEEWE FAARGGLKGQ 180
  181 VYPWGNKFQP NRTNLWQGKF PKGDKAEDGF HGVSPVNAFP PQNDYGLYDL VGNVWEWTAS 240
  241 QYQAADQDMR VLRGASWIDT ADGSANHRAR VTTRMGNTPD SASDNLGFRC ASGAGRPPGE 300
  301 L

Type	Start	End	Confidence
Signal Peptide	1	20	0.95
N-region	1	11
H-region	12	17
C-region	18	20
Cleavage Site	20	21
Non-Cytoplasmic	21	301	0.99