YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	SIL1_BOVIN
Protein type:	Globular with Signal Peptide
Type Confidence:	0.98
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPHQGLLLFR MAPLCVLLSM LMVSCFNFCL CHKNSEFALT NPEKSSTKET ERKETEEELE  60
   61 PKILEVFHPT HEWQALRPGQ AVPAGSHVRL NLQTGAREVK LHDEDKFQTN LKGLKKGKRL 120
  121 DINTNTYTSQ DLKNALAKFK EGAEMENSKE DQERQAKVKR LFRPIEELKK DFEELNVVIE 180
  181 TDMQIMVRLI NKFNSSSSSL EEKIAALFDL EYYVHQMDNA QDLLSFGGLQ VVINGLNSTE 240
  241 PLVKEYAAFV LGAAFSSNPK VQVEAIEGGA LQKLLVILAT EQPLTTKKKA LFALCSLLRH 300
  301 FPYAQQQFLK LGGLQVLRSL VQEKGMEVLA VRVVTLLYDL VTEKMFAEED AELTWDMSPK 360
  361 RLQQYRQVHL LPSLQEQGWC EITAHLLALP EHDAREKVLQ TLGALLATCR DRFHQDTQLH 420
  421 RTLGTLQAEY QALAALELQE GEDEGYFREL LDSIDSLLTE LR

Type	Start	End	Confidence
Signal Peptide	1	31	0.94
N-region	1	22
H-region	23	28
C-region	29	31
Cleavage Site	31	32
Non-Cytoplasmic	32	462	0.99