YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	RUVA_CAMJR
Protein type:	Transmembrane
Type Confidence:	0.64
Topology Confidence:	0.56
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVVGIEGIIT KKEPTFIIVK CASGLSYGIF ISLFCSAKIQ TQEKHEFFIT QIIKEDSNKF  60
   61 YGFLDKDEQK MFEMLLKVNG VGANTAMAVC SSLDVNSFYK ALSLGDESVL KKVPGIGPKS 120
  121 AKRIIVELSD TKTKLENVSD DKSEALAALL TLGFKQEKII SVLASAQATG TSELIKEALK 180
  181 KLG

Type	Start	End	Confidence
Cytoplasmic	1	15	0.56
Transmembrane Helix	16	37	0.58
Non-Cytoplasmic	38	183	0.92