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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: PARN_ARATH
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRRHKRWPLR SLVCSFSSSA AETVTTSTAA SATAAFPLKH VTRSNFETTL NDLRSLVKAA  60
   61 DFVAIDLEMT GVTSAPWRDS LEFDRYDVRY LKVKDSAEKF AVVQFGVCPF RWDSRTQSFV 120
  121 SYPHNFFVFP RQELTFDPPA HEFLCQTTSM DFLAKYQFDF NTCIHEGISY LSRREEEEAS 180
  181 KRLKMLHGED GIDSSGETEE LKLVRLADVL FAARMEKLLN EWRSGLLHGG NASSEFPRIS 240
  241 NGSNQSMETV FHHMRPALSL KGFTSHQLRV LNSVLRKHFG DLVYIHSNDK SSSSRDIVVY 300
  301 TDSDSDKENL MKEAKDERKR LAERKIQSAI GFRQVIDLLA SEKKLIVGHN CFLDIAHVYS 360
  361 KFVGPLPSTA EKFVASINSH FPYIVDTKIL LNVNPMLHQR MKKSSTSLSS AFSSLCPQIE 420
  421 FSSRSSDSFL QQRVNIDVEI DNVRCSNWNA GGKHEAGYDA FMTGCIFAQA CNHLGFDFKQ 480
  481 HSQLDDFAQN EKLEKYINRL YLSWTRGDII DLRTGHSNAD NWRVSKFKYE NIVLIWNFPR 540
  541 KLKARGIKEC ICKAFGSASV TSVYHVDDSA VFVLFKNSEL VWDFLALKRQ LESSDGPVSV 600
  601 LHPLSKILEG GNTGAADYEA YKEICSSHVS EVMFSDQAET VGVKSRTRPN AQCETETREE 660
  661 NTVTVTHKAS DLIDAFLANR VEVETATSN

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle