YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	PAM17_EMENI
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.88
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRGAALCTRV SSTTLNPVTL QTSAIYQTIS LKNQTRPSST STVRFLKASP TLRTSSARPQ  60
   61 AQIATSCINA KNTISVRSNS TTSTSAREEA AKLDWNSYFK LRASRRRYTL ASSIVSSAVS 120
  121 TVVGVQVLSS QNLENLGAQV MGLDPFVVLG MATAACGAVG WLVGPFLGNA VWGLVNRSYK 180
  181 KAFLVKEKEF FDRIKRYRVD PSSNSMTNPV PDYYGEKIGS VQGYRQWLKD QRAYNRKRRS 240
  241 FIK

Type	Start	End	Confidence
Cytoplasmic	1	107	0.99
Transmembrane Helix	108	129	0.93
Non-Cytoplasmic	130	147	0.90
Transmembrane Helix	148	172	0.88
Cytoplasmic	173	243	0.98