YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|238880671
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.86
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFSLGVQNRL FTRRALFSGF RFNSTTTTTT TASQPRLTWV DYFQLKKQNN RINTIAGVFT  60
   61 GLGGAFITLS YLGNIEIDVE KPIMGFDPLM VMGGAVILGG LVGFLVGPFI GSSIFRLTNR 120
  121 AQLKQFELKN TEFLSRLRIK RPDPSSQSFS NPIPDYYGEK IYSLKDYKQW LRDCNAFRRK 180
  181 SKEFL

Type	Start	End	Confidence
Cytoplasmic	1	51	0.96
Transmembrane Helix	52	73	0.90
Non-Cytoplasmic	74	90	0.86
Transmembrane Helix	91	115	0.86
Cytoplasmic	116	185	0.96