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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: PALI_YARLI
Protein type: Transmembrane
Type Confidence: 0.63
Topology Confidence: 0.58
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGLRMKSATG LLVILLIAFA LQLVAVLSVP VTKTISLGSY QDHKFGVFGY CNVKDGTCSP  60
   61 AGVGYNLVDS DNAGFSLPSN ARHTLSNLLI VHPIATGFTL ILTVLAMLAH IQGPASSSRY 120
  121 LLFCLVFSLP TFLLVLLSFL VDILLFVPHL DWGGWIVLAA TILVAISGVV LCVMRRTLSS 180
  181 KKAMKKHQLD TTNELSAFSS HKHLNSFTYS SKENVPQFSE LRYETSHDTS KDEEVLPLTS 240
  241 HVYEEPGHHV GDTSYASQGT NNSRVNLLTS EEPQAPKRES PFKDQRQDRY TPDRYGPSPD 300
  301 RYDQGGPGRP PNGSRGVPPR RPSNGPTPPG QGPSPTGAYG RNNNPNYNGG YNNRLPRPRG 360
  361 PPGSNNSSPF LGARNGPGLT PPHNLQTATT GPMQLPAGTY LPGEEPANSP DTYGPGVIPI 420
  421 PEIRRESKVP GASPTPPPVS GNSPPTETSE SGVSRPYRGN YSRRGSEASA QTPPNAQPNP 480
  481 PPGGAQNYEY VPARQQWNLT TEESNATAPA PGPQPLQRNH SYDTYNPYRS ETPSAPGSRA 540
  541 QSQGTDDNLG TLHQPVPTTV TPSNSGALNN KDSPWYSPPV DEQFRNSFIP DAPVSPSESI 600
  601 SSNFTSVSQR GINPRYFGAD GPPGGLHQGA PPPPHMRGPP PHMGMGGPNM GGHNMGGHNM 660
  661 GGPPPNMGPR PPYGGGGPGH GNKHDLLLSG NPDSQFQPQT RRKPGRGGRP GMSPASLMGR 720
  721 DTGPYSMR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle