YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	NPD_CAMJR
Protein type:	Globular with Signal Peptide
Type Confidence:	0.77
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKNIMILSGA GLSAPSGLKT FRDNDGLWEE YDVMEVCSAT GFRKNPKKVL DFYDARRVQL  60
   61 QNVKPNHAHE KIAQLKEKWG KNLFVITQNV DDLLERAGCK DVVHLHGFLP ELRCLKCEGI 120
  121 FNIGYEKIID KQCPKCKSKD LRHNIVMFEE QAPAYATLYS LLNQTSLFIS IGTSGAVLPV 180
  181 GRYASMCEKS ILNIYEKDAN LERYFDKIYI EDIINAIDKI ALDIENFMKD GNV

Type	Start	End	Confidence
Signal Peptide	1	18	0.80
N-region	1	9
H-region	10	15
C-region	16	18
Cleavage Site	18	19
Non-Cytoplasmic	19	233	0.97