YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	MURG_VIBF1
Protein type:	Globular with Signal Peptide
Type Confidence:	0.88
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKNKNKRLLV MAGGTGGHVF PGLAVAKQLQ SEGWEIRWLG TADRMEADLV PKHGIEIDFI  60
   61 KVKGLRGQGL KKLIAAPFQI LGAISQAKKH IKAWQPDVVL GMGGYVSGPG GIAAWLSGIP 120
  121 VVLHEQNAVA GLTNQWLSKI AKRVFQAFPG AFPNAEVVGN PVREDVCQLP HPKERFAQRT 180
  181 GPIRLLVMGG SQGARILNTT LPEALPQLSH EIEIWHQAGK GSQETVEQAY RDNGIADAKV 240
  241 TEFIDNVAEA YAWADLLVCR SGALTVSEVS AAGVGSIFIP FMHKDRQQAL NADHLVQCGA 300
  301 AQMIEQQDLT VQGLVDTLNG LERKQLLEMA CNARDAAIID ADVRVANAIK SLAK

Type	Start	End	Confidence
Signal Peptide	1	26	0.85
N-region	1	17
H-region	18	23
C-region	24	26
Cleavage Site	26	27
Non-Cytoplasmic	27	354	0.98