YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	MRAY_RUEPO
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.79
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Predicted Protein Segments [Hide List]:

Type	Start	End	Confidence
Non-Cytoplasmic	1	20	0.96
Transmembrane Helix	21	43	0.92
Cytoplasmic	44	69	0.89
Transmembrane Helix	70	91	0.87
Non-Cytoplasmic	92	96	0.84
Transmembrane Helix	97	117	0.90
Cytoplasmic	118	131	0.87
Transmembrane Helix	132	150	0.94
Non-Cytoplasmic	151	168	0.91
Transmembrane Helix	169	191	0.88
Cytoplasmic	192	199	0.78
Transmembrane Helix	200	220	0.94
Non-Cytoplasmic	221	235	0.86
Transmembrane Helix	236	256	0.91
Cytoplasmic	257	262	0.82
Transmembrane Helix	263	283	0.93
Non-Cytoplasmic	284	288	0.84
Transmembrane Helix	289	311	0.94
Cytoplasmic	312	337	0.93
Transmembrane Helix	338	357	0.93
Non-Cytoplasmic	358	360	0.79

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLYWLTALSD GGDVWNLFRY ITFRAGGAFM TALIFGFLFG RPLINVLRRK QGKGQPIRDD  60
   61 GPEGHFSKAG TPTMGGLLIV GALLTSTLLW ARWDNPFVWM VLFVTLAYAL IGFADDYAKV 120
  121 SKQNTKGVSG KMRLALGVII AVIAALWASY NHPAELQNQL ALPVFKDTLI NLGLLYVPFA 180
  181 ICVIVGSANA VNLTDGLDGL AIMPAMIAAS TLGVIAYAVG RVDFTEYLDV HYVPGTGEIL 240
  241 IFTAALFGAG LGFLWYNAPP AAVFMGDTGS LALGGALGAI AVATKHELVL AIVGGLFVVE 300
  301 ALSVIIQVLY FKRTGKRVFL MAPIHHHYEK KGWAEPTIVI RFWIISLILA MIGLATLKVR 360
  361