YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	MRAY_GEOKA
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.71
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Predicted Protein Segments [Hide List]:

Type	Start	End	Confidence
Non-Cytoplasmic	1	5	0.95
Transmembrane Helix	6	28	0.95
Cytoplasmic	29	48	0.96
Transmembrane Helix	49	70	0.93
Non-Cytoplasmic	71	78	0.78
Transmembrane Helix	79	97	0.93
Cytoplasmic	98	116	0.84
Transmembrane Helix	117	135	0.91
Non-Cytoplasmic	136	150	0.80
Transmembrane Helix	151	170	0.92
Cytoplasmic	171	177	0.70
Transmembrane Helix	178	195	0.96
Non-Cytoplasmic	196	201	0.80
Transmembrane Helix	202	220	0.96
Cytoplasmic	221	227	0.76
Transmembrane Helix	228	247	0.91
Non-Cytoplasmic	248	253	0.71
Transmembrane Helix	254	275	0.92
Cytoplasmic	276	299	0.86
Transmembrane Helix	300	320	0.92
Non-Cytoplasmic	321	324	0.71

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPEQAIVIAM AVSFLITVVL SPLFIPFLRR LKFGQSIREE GPKSHQKKSG TPTMGGIMIL  60
   61 LAIVATTLWI TPKIAGLSTR TYLLLLVTVG YGVLGFLDDM IKVVMKRNLG LTSRQKFIGQ 120
  121 LLIAAIFFAV YRQSGFSTVL HIPGADWSVD LGWAYGVLLL FMLVGGSNAV NLTDGLDGLL 180
  181 AGTAAIAFGA YAVLAWNQGQ YDVAVFCVAV VGAVLGFLVF NAHPAKVFMG DTGSLALGGA 240
  241 IAAVAVLTKL ELLLVIIGGV FVIETLSVII QVASFKTTGR RVFRMSPLHH HYELVGWSEW 300
  301 RIVVTFWAVG LLFAMLGIYI EVWM