YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	MRAY_CAMJR
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.65
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Predicted Protein Segments [Hide List]:

Type	Start	End	Confidence
Non-Cytoplasmic	1	15	0.89
Transmembrane Helix	16	41	0.80
Cytoplasmic	42	62	0.96
Transmembrane Helix	63	85	0.87
Non-Cytoplasmic	86	89	0.88
Transmembrane Helix	90	108	0.96
Cytoplasmic	109	128	0.84
Transmembrane Helix	129	146	0.97
Non-Cytoplasmic	147	164	0.82
Transmembrane Helix	165	184	0.87
Cytoplasmic	185	192	0.71
Transmembrane Helix	193	212	0.93
Non-Cytoplasmic	213	227	0.84
Transmembrane Helix	228	249	0.92
Cytoplasmic	250	255	0.82
Transmembrane Helix	256	276	0.93
Non-Cytoplasmic	277	282	0.76
Transmembrane Helix	283	304	0.93
Cytoplasmic	305	330	0.88
Transmembrane Helix	331	350	0.85
Non-Cytoplasmic	351	353	0.65

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MYYLSDLSHY AFFTYISVRA GFAFFIALCL SLFLMPKFIT WAKAKNASQP IYEYAPETHK  60
   61 TKCHTPTMGG LIFISSAVIA SLFCIKFDNI FAISALLCLI LFCLIGLIDD LGKVLKKDNH 120
  121 SGLSPRMKLL AQIIAGLICI LPLYFSSELS TELFIPFYKH PLFDMEIFAI AFWILVLISS 180
  181 SNAVNLTDGL DGLATVPSIF SLSTLGIFLY LSGNLNYSEY LLLPKIQGLG EVVIICAALI 240
  241 GALMGFLWYN CYPAQVFMGD SGSLALGGFI GFLAIISKNE ILLLLIGFVF VLETVSVILQ 300
  301 VGSFKIFNKR VFKMAPIHHH FEKVGWVENK IIVRFWMIAL LSNLLALASI KLR