YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: LIPE_RAT
Protein type: Globular with Signal Peptide
Type Confidence: 0.88
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRDPVFLLGF WSLYCCFPAG SLTTLRPQGS LRDEHHKPTG VPVTITTKPS VTFNIRTSKD  60
   61 PEHEGCNLSL GDSKLLENCG FNMTAKTFFI IHGWTMSGMF ESWLHKLVSA LQTREKEANV 120
  121 VVVDWLPLAH QLYIDAVSNT RVVGRRVAGM LNWLQEKGEF SLGDVHLIGY SLGAHVAGYA 180
  181 GNFVKGTVGR ITGLDPAGPM FEGVDINRRL SPDDADFVDV LHTYTLSFGL SIGIRMPVGH 240
  241 IDIYPNGGDF QPGCGFNDVM GSFAYGTISE MVKCEHERAV HLFVDSLVNQ DKPSFAFQCT 300
  301 DPNRFKRGIC LSCRKNRCNN IGYNAKKMRK KRNSKMYLKT RAGMPFRVYH YQLKVHMFSY 360
  361 KNSGDIQPDL YITLYGSNAD SQNLPLEIVE KIELNATNTF LVYTEEYLGD LFKIRLTWEG 420
  421 VSSSWYNLWN EFRSYLSQPS SPSRELHIRR IRVKSGETQR KVAFCVQDPM KNSISPGQEL 480
  481 WFYKCQNDCR VKN

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle