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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: IGA1_STRSA
Protein type: Transmembrane
Type Confidence: 0.83
Topology Confidence: 0.68
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKKFLGEKQT RFAFRKLAVG LVSAAISSLF FVSIVGVDSV QAQEKLNVHY KYVTDTEITP  60
   61 QEKELIVSGV PRMPEGNEET YYLVYRLNSN AGAKTLPNTG DNNSNTMMAA GLLLTTIGLV 120
  121 VFAVSKRKVQ SKFLLTVLVG ASVGGGLILS VDALENGSLL QYNAEYQVSA GESLPSPGEI 180
  181 SGYTYVGYIK DESIKKLLDN KIPDNQQNAN VDKEALNQNK KLDYSVSFDK NGLKNQTVGV 240
  241 NTIEPQDEVL SGRVAKPELL YKETSIETEI AYGEQIQENP DLAEGTVRVK QEGKPGRKIE 300
  301 VVRIFTVDNA EVSREVLSTK IEEATPKIVE KGTKKLEAPS EKPVTSNLVQ PEQVAPLPEY 360
  361 TGVQSGAIVE PEQVASLPEY SGTLSGAIVE PEQIEPEIGG VQSGAIVEPE QVTPLPEYTG 420
  421 TQAGAVVSPE QVAPLPEYTG TQSGAIVEPA QVTPLPEYTG VQSGAIVKPA QVTPLPEYTG 480
  481 TQSGAIVEPE QVTPSPEYTG VQAGAIVEPE QVASLPEYTG SQAGAIVEPE QVEPPQEYTG 540
  541 NIEPAAPEAE NPTEKAQEPK EQKQEPEKNI ELRNVSDVEL YSLADGKYKQ HVSLDAIPSN 600
  601 QENYFVKVKS SKFKDVFLPI SSIVDSTKDG QPVYKITASA EKLKQDVNNK YEDNFTFYLA 660
  661 KKAEREVTNF TSFSNLVQAI NNNLNGTYYL AASLNANEVE LENGASSYIK GRFTGKLFGS 720
  721 KDGKNYAIYN LKKPLFDTLS AATVENLTLK DVNISGKTDI GALANEANNA TRINNVHVDG 780
  781 VLAGERGIGG LVWKADNSKI SNSSFKGRIV NSYETKAPYN IGGLVGQLTG INALVDKSKA 840
  841 TITISSNADS TNQTVGGLAG LVEKDALISN SYAEGNINNV KRFGSVAGVA GYLWDRDSSE 900
  901 ERHAGRLHNV LSDINVMNGN AISGYHYRGM RITDSYSNKD NRVYKVTLEK DEVVTKESLE 960
  961 ERGTILDVSQ IASKKSEINS LSAPKVETLL TSTNKESDFS KVKDYQASRA LAYKNIEKLL1020
 1021 PFYNKATIVK YGNLVKEDST LYEKEILSAV MMKDNEVITD IASHKEAANK LLIHYKDHSS1080
 1081 EKLDLTYQSD FSKLAEYRVG DTGLIYTPNQ FLQNHSSIVN EVLPDLKAVD YQSEAIRNTL1140
 1141 GISSGVSLTE LYLEEQFAKT KENLANTLEK LLSADAVIAS ENQTINGYVV DKIKRNKEAL1200
 1201 LLGLTYLERW YNFNYGDVNV KDLVMYHMDF FGKGNVSPLD TIIELGKSGF NNLLAKNNVD1260
 1261 AYNISLANNN ATKDLFSTLA NYREVFLPNK TNNQWFKEQT KAYIVEEKSA IDEVRVKQEQ1320
 1321 AGSKYSIGVY DRITSDTWKY RNMVLPLLTM PERSVFVIST ISSLGFGAYD RYRNNEHRAG1380
 1381 AELNKFVEDN AQETAKRQRD HYDYWYRILD EQGREKLYRN ILVYDAYKFG DDTTVDKATV1440
 1441 EAQFDSSNPA MKYFFGPVGN KVVHNKHGAY ATGDSVYYMG YRMLDKDGAI TYTHEMTHDS1500
 1501 DNEIYLGGYG RRSGLGPEFF AKGLLQAPDH PDDATITVNS ILKYDKNDAS EKSRLQVLDP1560
 1561 TKRFQNADDL KNYVHNMFDV IYMLEYLEGM SIVNRLSDVQ KVNALRKIEN KYVRDADGND1620
 1621 VYATNVIKNI TMADAQKLNS FNSLIENDIL SAREYKNGDV ERNGYHTIKL FSPIYSALSS1680
 1681 EKGTPGDLMG RRIAYELLAA KGFKDGMVPY ISNQYEDDAK QNGKTISIYG KTRGLVTDDL1740
 1741 VLRKVFNGQF NNWTEFKKAM YEERKNKFDS LNKVTFDDTR QPWTSYATKT ISTVEELQTL1800
 1801 MDEAVLQDAN DNWYSWSGYK PEYNSAVHKL KKAVFKAYLD QTKDFRKSIF ENQK

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