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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: I17RD_DANRE
Protein type: Globular with Signal Peptide
Type Confidence: 0.56
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAGSRRLAHF FMASCLFLCY TASVNGGKRG NSDKCSYKQG TQTSSMDEGA RKLGVTFRYD  60
   61 NCSVNWSPLG KHAIHEVNNI SFSHLSCDSQ AAVVVHWMAS PLGIEHVKGF RVYLEDKNPE 120
  121 RKQCQHLILK DPRQLNFSYK TIRMSSQPFS SLAFETDYMV RIVPFPTFLN DSFFPPSFLR 180
  181 TNSCEVLLGP DNLVCKPFWK PKMLNVSQLG SNLHVVFDHA PSTFGFSIYY LYYKLRQEGP 240
  241 FRLKRCKPEQ NGPKTTCVLQ DVTPGTYAIE LRDDSNNTRR QTQYHVSQVH SPWAGPIRAM 300
  301 AITVPLVIMS AFATLFTVMC RKKQQENIYS HLDEESSESS SQTTALSADR PWPRPKIFIC 360
  361 YSSRDGAKHL AVIQSFAFFL QDFCGCEVSL DLWEHLEICK EGQMSWLSRR IDEAHFIITV 420
  421 CSKGLKHFVE KRHRKGKATS KEKNREPSAS DSSSSSRDLF IVASAIISEK LKEVHQKSSD 480
  481 LSRFMSVYFD YSHETDVPTS LSLAPKFKLM DQLPQLFARL HSRQLSLTDR EPQPPNVSKR 540
  541 NYFCSKSGRS LYVAIYNMHQ HVTQEPDWLE KELMPPPLPN KRTIPEKVDS GLVLNEVKLK 600
  601 HGSESECPPV RSNVLILPQT PQVGVSLSLS REDLGEGSSS QDAGSCRPVL HTDGSASPPE 660
  661 MPRDSGIYDS SVPSSELSIP LMDGLSPDHA DNSSLADSVS SSSGLGDEEP PAVSSLHCTA 720
  721 HTICKADLHH QHLHPSEGLI AAAST

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle