YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	HS150_YEAST
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQYKKTLVAS ALAATTLAAY APSEPWSTLT PTATYSGGVT DYASTFGIAV QPISTTSSAS  60
   61 SAATTASSKA KRAASQIGDG QVQAATTTAS VSTKSTAAAV SQIGDGQIQA TTKTTAAAVS 120
  121 QIGDGQIQAT TKTTSAKTTA AAVSQISDGQ IQATTTTLAP KSTAAAVSQI GDGQVQATTT 180
  181 TLAPKSTAAA VSQIGDGQVQ ATTKTTAAAV SQIGDGQVQA TTKTTAAAVS QIGDGQVQAT 240
  241 TKTTAAAVSQ IGDGQVQATT KTTAAAVSQI TDGQVQATTK TTQAASQVSD GQVQATTATS 300
  301 ASAAATSTDP VDAVSCKTSG TLEMNLKGGI LTDGKGRIGS IVANRQFQFD GPPPQAGAIY 360
  361 AAGWSITPDG NLAIGDNDVF YQCLSGTFYN LYDEHIGSQC TPVHLEAIDL IDC

Type	Start	End	Confidence
Signal Peptide	1	18	0.99
N-region	1	9
H-region	10	15
C-region	16	18
Cleavage Site	18	19
Non-Cytoplasmic	19	413	0.99