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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: GP156_MOUSE
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.63
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEPEINCSEF CDSFPGQELD RRPLHDLCKT TITESQHSST AASPLSPALL GIMWTFLSCG  60
   61 LLLVLFFLAF TIRCRKNRIV KMSSPNLNVV TLLGSCLTYI SAYLFGIQDA LEGSSVEALI 120
  121 QTRLSLLCIG TSLVFGPILG KSWRLYKVFT QRVPDKRVII KDLQLLGLVA ALVVADVILL 180
  181 VTWVLTDPIQ CLQMLGVSMK VTGRDVSCSL TNTHFCASRY SDVWIALVLG CKGLLLLYGA 240
  241 YLAGLTNHVS SPPVNQSLTI MVGVNLLLLT AGLLFVVTRY LHSWPNLVFG LTSGGIFVCT 300
  301 TTVNCCVFIP QLKQWKAFEG ENQTMRHMAK YFSTPSKSFH SQFDEDPSCH LRDEKSCMER 360
  361 LLTEKNAVIE SLQEQVSNAK EKLVKLMSAE CTYDSPEWAV PDAASARGLA LPGPSECPAV 420
  421 SENESGAAAR DSLHVPAACQ HVQGPGASRR DTSPSPAQQD NMPLKQYCDH LDTGCNQKPK 480
  481 AEQSEGPERG DQEPMAPSQR LMADGVACEP HKPRQSPEGL PKKLPGVSSV VREKLQEVLQ 540
  541 ELDLGSEAPL SPLPCPQQLW KSTTSRSPQK LSPSKLGFSP YVVRRRRAAQ RARSHIPGSV 600
  601 GLNVGHQANS TVSSSQSGLI VQNRDSPRLD HHNARSKVPR SSSVKPSPLS EPRRKQGTLE 660
  661 GSKQCETEPQ EAGGACNVAF PCQSSASVQA QSPAAPCLPS SPALPRQRQP RPRLSPGCPS 720
  721 LSSGCYNLDS ESSSSDEFFC RCHRPYCEIC FQSSLDSNDS DTSDSDLEQA SGLASWEKLW 780
  781 ARSKPVVNFK DDLKPTLV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle