YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	GCSH_RAT
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSLRVVRSVR AVACSLRIAL ASCPPRPWAP SAAAVRSLRT GSALLSVRKF TEKHEWVTAK  60
   61 DGIGTVGISN FAQEALGDVV YCSLPEVGTK LKKQEEFGAL ESVKAASELY SPLSGEVTEV 120
  121 NEALAENPGL VNKSCYEDGW LIKMTLSDPS ELDELMSEEA YEKYVKSIEE

Type	Start	End	Confidence
Signal Peptide	1	33	0.98
N-region	1	24
H-region	25	30
C-region	31	33
Cleavage Site	33	34
Non-Cytoplasmic	34	170	0.99