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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: DNJC3_RAT
Protein type: Globular with Signal Peptide
Type Confidence: 0.88
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVAPGSVRSR LGAVFPFLLV LVDLQYEGAE CGVNADVEKH LELGKKLLAA GQLADALSQF  60
   61 HAAVDGDPDN YIAYYRRATV FLAMGKSKAA LPDLTRVIEL KMDFTAARLQ RGHLLLKQGR 120
  121 LAEAEDDFKK VLKSNPSENE EKEAQSQLVK ADEMQRLRAQ ALDAFDSADY TAAITFLDEI 180
  181 LEVCVWDAEL RELRAECFIK EGEPRKAISD LKAASKLKND NTEAFYKISI LYYQLGDHEL 240
  241 SLSEVRECLK LDQDHKRCFA HYKQVKKLNK LIGSAEELIR DGRYTDATSK YESVMKAEPS 300
  301 VAEYTVRSKE RICHCFSKDE KPVEAIKICS EVLQLEPDNV NALKDRAEAY LIEEMYDEAI 360
  361 QDYEAAQEQN ENDQQIREGL EKAQRLLKQS QKRDYYKILG VKRNAKKQEI IKAYRKLALQ 420
  421 WHPDNFQSEE EKKKAEKKFI DIAAAKEVLS DPEMRRKFDD GEDPLDAETQ QGGGSNPFHR 480
  481 SWDSWQGFNP FSSGGPFRFK FHFN

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle