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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CO3A1_RAT
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMSFVQCGTW FLLTLLHPSL ILAQQSNVDE LGCNYLGQSY ESRDVWKPEP CQICVCDSGS  60
   61 VLCDDIMCDD EPLDCPNPEI PFGECCAICP QPSTPAPVIP DGNRPQGPKG DPGPPGIPGR 120
  121 NGDPGLPGQP GLPGPPGSPG ICESCPTGGQ NYSPQFDSYD VKSGVGGMGG YPGPAGPPGP 180
  181 PGPPGSSGHP GSPGSPGYQG PPGEPGQAGP AGPPGPPGAI GPSGPAGKDG ESGRPGRPGE 240
  241 RGLPGPPGIK GPAGIPGFPG MKGHRGFDGR NGEKGETGAP GLKGENGLPG DNGAPGPMGP 300
  301 RGAPGERGRP GLPGAAGARG NDGARGSDGQ PGPPGPPGTA GFPGSPGAKG EVGPAGSPGS 360
  361 NGSPGQRGEP GPQGHAGAQG PPGPPGNNGS PGGKGEMGPA GIPGAPGLLG ARGPPGPAGA 420
  421 NGAPGQRGPS GEPGKNGAKG EPGARGERGE AGSPGIPGPK GEDGKDGSPG EPGANGVPGN 480
  481 PGERGAPGFR GPAGPNGAPG EKGPAGERGG PGPAGPRGVA GEPGRDGTPG GPGIRGMPGS 540
  541 PGGPGNDGKP GPPGSQGESG RPGPPGPSGP RGQPGVMGFP GPKGNDGAPG KNGERGGPGG 600
  601 PGLPGPAGKN GETGPQGPPG PTGAPGDKGD AGPPGPQGLQ GIPGTSGPPG ENGKPGEPGP 660
  661 KGEAGAPGVP GGKGDSGAPG ERGPPGTAGT PGLRGGAGPP GPEGGKGPAG PPGPPGTSGP 720
  721 PGLQGMPGER GGPGSPGPKG EKGEPGGAGA DGVPGKDGPR GPAGPIGPPG PAGQPGDKGE 780
  781 GGAPGLPGIA GPRGGPGERG EHGPPGPAGF PGAPGQNGEP GAKGERGAPG EKGEGGPPGA 840
  841 AGPPGGSGPA GPPGPQGVKG ERGSPGGPGA AGFPGGRGLP GPPGNNGNPG PPGPSGAPGK 900
  901 DGPPGPAGNS GSPGNPGVAG PKGDAGQPGE KGPPGAQGPP GSPGPLGIAG LTGARGLAGP 960
  961 PGMPGPRGSP GPQGIKGESG KPGASGHNGE RGPPGPQGLP GQPGTAGEPG RDGNPGSDGQ1020
 1021 PGRDGSPGGK GDRGENGSPG APGAPGHPGP PGPVGPSGKN GDRGETGPAG PSGAPGPAGA1080
 1081 RGAPGPQGPR GDKGETGERG SNGIKGHRGF PGNPGPPGSP GAAGHQGAVG SPGPAGPRGP1140
 1141 VGPHGPPGKD GSSGHPGPIG PPGPRGNRGE RGSEGSPGHP GQPGPPGPPG APGPCCGGGA1200
 1201 AIAGVGGEKS GGFSPYYGDD PMDFKINTEE IMSSLKSVNG QIESLISPDG SRKNPARNCR1260
 1261 DLKFCHPELK SGEYWVDPNQ GCKMDAIKVF CNMETGETCI NASPMTVPRK HWWTDAGAEK1320
 1321 KHVWFGESMN GGFQFSYGNP DLPEDVLDVQ LAFLRLLSSR ASQNITYHCK NSIAYMDQAN1380
 1381 GNVKKSLKLM GSNEGEFKAE GNSKFTYTVL EDGCTKHTGE WSKTVFEYQT RKAMRLPIID1440
 1441 IAPYDIGGPD QEFGVDIGPV CFL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle