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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CASQ2_RAT
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKRIYLLVVG LYLLSFSRAE EGLNFPTYDG KDRVVSLSEK NLKQVLKRYD LLCLYYHEPV  60
   61 SSDKVAQKQF QLKEIVLELV AQVLEHKNIG FVMVDSRKEA KLAKRLGFSE EGSLYVLKGG 120
  121 RTIEFDGEFA ADVLVEFLLD LIEDPVEIVN NKLEVQAFER IEDQIKLLGF FKNEDSEYYK 180
  181 AFQEAAEHFQ PYIKFFATFD KGVAKKLSLK MNEVGFYEPF MDEPSVIPNK PYTEEELVEF 240
  241 VKEHQRPTLR PLRPEDMFET WEDDLNGIHI VAFAEKSDPD GYEFLEILKQ VARDNTDNPD 300
  301 LSILWIDPDD FPLLVAYWEK TFKIDLFKPQ IGVVNVTDAD SVWMEIPDDD DLPTAEELED 360
  361 WIEDVLSGKI NTEDDDNEDE DDDGDNDNDD DDDDDDNSDE DNDDSDDDDD DDE

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle