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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: ATG9_ASPFU
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.69
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMTSNILSRF LPPNGSPSVY ETIRNHDATS DSSDVEERAG LTLEDGPGEH YSDRELEDAM  60
   61 ADAGRSRLLD RDDAFISRRS PRKASVAGPS KSNSRRRHFS RPRWAHDASP SHDFEDGDDD 120
  121 VPASLLVEGH HDDDELKSRL PPPPTSHITP DDRQPSRPGP STRGVRGRGR AAKEQQPLHH 180
  181 ADRRRAPAVR WSLGQPNLNT VDPKEKAMWM WANVENLDNF LKEVYTYFLG NGIWSILLNR 240
  241 VLSLLTFAFV VGFSTFLTNC IDYHKVRGSK SLNDILIKQC TTKMSLSSTF LLWLLTLFWI 300
  301 GKAFQCLLDI RRLKHMHDFY YYLLGVSDTD IQTISWQEIV SRLMTLRDAN PATAGAVSAR 360
  361 HRKFMGSQSK QRMDAHDIAN RLMRKENYLI ALINKDILDL TLPIPFLRNK QLFSRTLEWN 420
  421 INLCIMDYVF NEQGQVRTLF LKDTHRKALS EGLRRRFIFA GIMNIFVAPF IVVYFMMHYF 480
  481 FRYFNEYKKN PSQIGSRQYT PLAEWKFREF NELWHLFERR INMSYPFASR YVDQFPKDKT 540
  541 VQVAGFVAFV SGALASVLAL ASIVDPELFL GFEITHDRTV LFYLGVFGSV WAVARGLVPE 600
  601 ETTVFDPEYA LLEVINYTHY APSHWKGRLH SDEVRREFTE LYQMKIVIFL EEILSMIFTP 660
  661 FILWFNLPKC SDRLIDFFRE FTVHVDGMGY LCSFAVFDFK KGTNVINQGD RRDPARQDLR 720
  721 ADYFSTKDGK MLASYYGFLD NYGANHRGSH PATRRQFYPP PAFPTLGSPP AGEMGTIGDR 780
  781 LDQTQTRHGL AGPFMGQQSV FGPSRYGLTG LGDHASPAPS ILLDPHHQPS TSGFRGTSRA 840
  841 AGVQRYRSSR AHPPISGTIA DGDESPVATG RSDPSRPAAN AAGASSAGGV GTSDSNLGDS 900
  901 WRMNLVEDGD DDNTEGGENV DAIAGGAGVL GLIQQFQRVN KDSRGRTAVG L

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle