YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	ALL2_ASPFU
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAALLRLAVL LPLAAPLVAT LPTSPVPIAA RATPHEPVFF SWDAGAVTSF PIHSSCNATQ  60
   61 RRQIEAGLNE AVELARHAKA HILRWGNESE IYRKYFGNRP TMEAVGAYDV IVNGDKANVL 120
  121 FRCDNPDGNC ALEGWGGHWR GANATSETVI CDRSYTTRRW LVSMCSQGYT VAGSETNTFW 180
  181 ASDLMHRLYH VPAVGQGWVD HFADGYDEVI ALAKSNGTES THDSEALQYF ALEAYAFDIA 240
  241 APGVGCAGES HGPDQGHDTG SASAPASTST SSSSSGSGSG ATTTPTDSPS ATIDVPSNCH 300
  301 THEGGQLHCT

Type	Start	End	Confidence
Signal Peptide	1	30	0.95
N-region	1	21
H-region	22	27
C-region	28	30
Cleavage Site	30	31
Non-Cytoplasmic	31	310	0.99