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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: AKR1_NEUCR
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.54
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVHHDGADAH AGHAAPAQPP MKSDTATPKL NSEVELGSLP SEAHNDIMQM ARVGDITGME  60
   61 KLFAAGEYDA TYSDDEGITP LHWAAINNQY AMCKFLIDKG AEINKKGGES VATPLQWAAQ 120
  121 RCHYYTVHLL LQHGADPLIT DSQGYNTLHI STFNGNVLLI VLLLHQGIPV DVEDAYGHTA 180
  181 LMWSAYKGFP ACVDVFLRWG ASVHAKDEQG FTALHWALVK GSPGCIQKLI EYGADRFAKT 240
  241 ANGKTPAITA QELNTVAAWQ KALDECGYDE HGNAIVPSWP GASYLLQDRR SFMTKFTFLW 300
  301 PFVMVWATMV VMAGMPVFVG IPLGVLAGYA VQWVAQQVIA YAPPDMRQLQ KTPWMAGIFA 360
  361 GSLFLCIMNW LLHIFGSTMF GQDSAVIPNL LFAFFISMTI WFYIRCMVDD PGFVPKMGGV 420
  421 AEQKAVIDEL ISLWKFDESN FCVTCMIRTP LRSKHCRRCQ RCVAKHDHHC PWVYNCIGVN 480
  481 NHRHFFFYLI NLTLSVVTYD WLTYRYLSTL SETASDECNI LAPSLCRIVN ADTYSLLTAI 540
  541 WASLQLTWVS MLLFVQFVQV SSAMTTYENM HGIDNYSATS LNSSFTSTGA PLNPPSLPAP 600
  601 GPSPAAGGAR HGGRHAHGHN HKQGFIKQWS RLLGVDAFIE TAAGRGATTG KGSKRNKRGN 660
  661 PYSRGCVTNC KDFWCDPSPM FGKHENGAAV LGGVPVNYTD MYESPGVMTS GGGGRRRGGG 720
  721 YESVAGEEV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle