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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: AKR1_ASPFU
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.63
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSGTPSTEP ESSGRSAGMS TSPTSIPAGK GTTTPPKVTQ QDVSVELKNM RPDRSPPKGS  60
   61 IPLGEDIMQI ARIGEIGPMQ RLFDEKKFTA NYQDEEGITP LHWAAINNQY AMCKFLLDNG 120
  121 ADVNAKGGDS VATPAMWAAQ RCHYYIVHLL LQHGADPLLT DVQGYNILHL ATIDGNAFLL 180
  181 VLLLHQEIPV DVIDQQGHTG LMWAAYKGYP ACVDLFLRWG ANVNAVDDGG LTPLHWALVK 240
  241 GSLPCVQKLI EYGADRFAKT RDGKSPATVA GEMNTTRVWY RALDECGYDV DGNTKVLPMG 300
  301 LTSWLRNKSV MSKFFFLWPF LMVYAAVYIL SHMVIYAAIP IMLVATFGLQ WVAQKAASQA 360
  361 PSEYRVLQKT PYLSGVFAGS LFWVGVTYIF SVLPATYSTS PILNILFAVF YCLTTYFYIY 420
  421 SMTEDPGFVP KTGSRNQQKV VINELFEQWK FDEENFCVFC MVRKPLRSKH CKRCSRCVAK 480
  481 HDHHCPWIDN CVGANNLRHF VLYIICLEIG IILFLQLTYR YINILPAPVE HACNIINEEL 540
  541 CGFVLRDPFT LVLDLWIAIQ LVWVTMLCAV QLVQISRNQT TYENMRGHSI DRSYPSSRAF 600
  601 ASAITAGTTS LEAAGLSATG QGPNPALARG HSHRGRRHGC LQQWSSLLGI DTFFATARDG 660
  661 LRDGPRADRP KNPFSRGIIT NCRDFWCDPA PYFGKREPGT AMLGGEIVNY NQMYEVPMRM 720
  721 YSDGRYQSVA HDDPEQHV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle