YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CBR1
Protein type:	Transmembrane
Type Confidence:	0.74
Topology Confidence:	0.51
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAIDAQKLVV VIVIVVVPLL FKFIIGPKTK PVLDPKRNDF QSFPLVEKTI LTHNTSMYKF  60
   61 GLPHADDVLG LPIGQHIVIK ANINGKDITR SYTPTSLDGD TKGNFELLVK SYPTGNVSKM 120
  121 IGELKIGDSI QIKGPRGNYH YERNCRSHLG MIAGGTGIAP MYQIMKAIAM DPHDTTKVSL 180
  181 VFGNVHEEDI LLKKELEALV AMKPSQFKIV YYLDSPDRED WTGGVGYITK DVIKEHLPAA 240
  241 TMDNVQILIC GPPAMVASVR RSTVDLGFRR SKPLSKMEDQ VFVF

Type	Start	End	Confidence
Cytoplasmic	1	7	0.51
Transmembrane Helix	8	26	0.70
Non-Cytoplasmic	27	284	0.81