YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	YHL026C
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.80
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKSSEPAPAT PTGFRNSIWF IIFYLFVIQA LGSAIISGGI EFAIAYAMYH SRVDLITLWA  60
   61 FPHTISGDCA LSLFIQVGLT WASEEILVGF DDYKRPVFRL NKWITKPSPL KTESNEEIPP 120
  121 PKKRFIVDYF ESKDNVVAKQ NTLYHKHNWL FGYLEVNRGI IPKGKEATLK GFLTSQFIHD 180
  181 STQSKFMNFI EWFVQKFIRS MILAIAMFIV IWPVTMGILA GIGHKVGSHD YYFNDYPLPQ 240
  241 VMKLIYAVVI AFVCTPVAII VIVLRNQFHE ELYYEGLANG TLQQDQEVCS TGNRSSGSTD 300
  301 QDISTTKQQS QEAVA

Type	Start	End	Confidence
Cytoplasmic	1	19	0.86
Transmembrane Helix	20	44	0.88
Non-Cytoplasmic	45	58	0.77
Transmembrane Helix	59	80	0.80
Cytoplasmic	81	200	0.98
Transmembrane Helix	201	223	0.91
Non-Cytoplasmic	224	243	0.91
Transmembrane Helix	244	264	0.96
Cytoplasmic	265	315	0.98