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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|62041678, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLSSLGCLLL CGSIALALGN AQKLPKGKKP SLKVHINTTS DSILLKFLRP NANVKLEGFL  60
   61 LGYGSNVSPN QYFPLPTEGK FTEAVVDAEP KYLIVVRPAP PPSQKKSCSG KSRPRKPLQL 120
  121 VVGTLTPSSV FLSWGFLINP HHDWTLPSHC PSDRFYTIRY REKDKEKKWI FQLCPATETI 180
  181 VENLKPNTVY EFGVKDNIEG GIWSKIFNHK TIVGSKNKVN GKIQSTYDQV HSVPVPRKLI 240
  241 PLTIIKQVIQ NVTHRASTKS PDKTPFGGTI LVHLIIPGLN ESTVKLPTSI MLEISDALKA 300
  301 QLAKNETLAL PAESKTPEVE KLAGQPVTVT PESVSRSTKP TLSSALDTAE TALVLSEKTS 360
  361 ETARSVLIPE FELPLSTLAP KRFPEFPEAK TAFPLEKPRG SWASSEEPWV VPGAKTSEDS 420
  421 RVVQPQTATY DVISSSTTSD ETEIEIHTAT RDPILDSVPP KTSRTAEQPR ATLAPIEALF 480
  481 ESRNVEIFTS PEVRPTTAAP QQTTSIPSTP KRQSTPKPPR VKPAPEPETR PSAQTTKAPR 540
  541 KTKKPGHHRL RRPKTTRSPE VPKSKPALEP ATVTPEILVP KIVPKPPQKP KATRRPEVPQ 600
  601 VKPAPRQTTS MPPKLKTPHS RMPAKEPVPK EPLHTTSKPK MPPSPEVADT TSVPKDERLS 660
  661 LKPDPEVTHS ETAPLETRGI PLIPVISPRP SQEELQTAME ETDQSTQELF TTKIPRTTEL 720
  721 AKTTQAPHRL HTAPVRPRIP GRPHGRPALN KTTTRPDKTK PRGTSHKNGV GTGTKQAPKP 780
  781 PSPGRNASVD SHATRKPGSV SGTRRPPIPH RHSSTRPVSP ERRPLPPNNV TGKPGRAGIV 840
  841 SSSRVTSPPL KATLHPIGTA TARPGAEQKE PTAPASEEEF GTTTDFSSSP TKETDPLGKP 900
  901 RFIGPHVRYI PKPENKPCSI TDSVRRFPTE EATEGNATSP PQNPPTNLTV VTVEGCPSFV 960
  961 ILDWEKPLND TVTEYEVISR ENGSFSGKNK SIQITNQTFS TVENLKPDTS YEFQVKPKNP1020
 1021 LGEGPASNTV AFSTESADPR VSEPISAGRD AIWTERPFNS DSYSECKGKQ YVKRTWYKKF1080
 1081 VGVQLCNSLR YKIYLSDSLT GKFYNIGDQR GHGEDHCQFV DSFLDGRTGQ QLTSEQLPTK1140
 1141 EGYFRAVRQE PVQFGEIGGH TQINYVQWYE CGTTIPGKW

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle