YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|57118001, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.86
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MISITEWQKI GVGITGFGVF FILFGILLYF DSVLLAFGNL LFLTGLSLII GLRRTFAFFF  60
   61 QRHKLKGTSF FLGGVAIVLL RWPLLGMLLE AYGFISLFKG FFPVVFGFLG SAFNIPFLST 120
  121 SLEGDCRPAP SSQNDLNGFL AAAASPLCRH LWGAAGKSEA WIHRPAVRTP GTR

Type	Start	End	Confidence
Cytoplasmic	1	9	0.90
Transmembrane Helix	10	29	0.95
Non-Cytoplasmic	30	34	0.77
Transmembrane Helix	35	56	0.90
Cytoplasmic	57	66	0.85
Transmembrane Helix	67	85	0.93
Non-Cytoplasmic	86	96	0.67
Transmembrane Helix	97	118	0.86
Cytoplasmic	119	173	0.87