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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: TSR1_MOUSE
Protein type: Transmembrane
Type Confidence: 0.53
Topology Confidence: 0.50
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAAHRSGPLK QQNKAHKGGR HHGGGSAQRD SKGRVGPKIL CKKLKRQLSR IDQRHRASQL  60
   61 RKQKRESVLA EKRQLGSKDG PPHQVLVVPL HSRISLPEAF KLLQNEDLGT VYLSERGSTQ 120
  121 SFMLLCPSLK HRWFFTYARP GDLHTLLDMA KVADTILFLL DPLEGWDSTG DYCLSCLFAQ 180
  181 GLPTYTLAVQ GLSGFPPKKQ IDARKKLSKM VEKRFPEDKL LLLDTQQESG MLLRQLANQK 240
  241 QRHLAFRDRR AYLFAHVADF VPSEESDLVG TLKISGYVRG RTLNVNSLLH IVGHGDFQMN 300
  301 QIDAPVDPFP LNPRVIKSQK KPNMAMEVCV TDAAPDMEED LKVLMKADPD HQESLQTEAI 360
  361 PDPMEGEQTW PTEEELDEAD DLLKQRSRVV KKVPKGTSSY QAEWILDEGD ESDGEGGEYD 420
  421 DIQHEGFMEE ESQDGSGEEE EEECETMTLG ESVRDDLYDE KVDAEDEERM LEKYKQERLE 480
  481 EMFPDEMDTP RDVAARIRFQ KYRGLKSFRT SPWDPKENLP RDYARIFQFQ NFVNTRKRIF 540
  541 KEIEEKEAEG AEVGWYVTLH VSDVPVSVVE YFRQGAPLIA FSLLPYEQKM SVLNMVVSRN 600
  601 PGNTEPVKAK EELIFHCGFR RFRASPLFSQ HTAADKHKFQ RFLTADAAFV VTVFAPITFP 660
  661 PASVLLFKQR RNGMHSLIAT GHLFSVDPDR MVIKRVVLSG HPFKIFTKMA VVRYMFFNRE 720
  721 DVMWFKPVEL RTKWGRRGHI KEPLGTHGHM KCSFDGKLKS QDTVLMNLYK RVFPKWTYDP 780
  781 YVPEPVPWVK SDISSTVSEV DME

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle