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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|59860161
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVRPRLSFPA PLLPLLLLLA AAAPAVPGAS GTCPERALER REEEANVVLT GTVEEILNVD  60
   61 PVQHTYSCKV RVWRYLKGKD VVAQESLLDG GNKVVIGGFG DPLICDNQVS TGDTRIFFVN 120
  121 PAPPYLWPAH KNELMLNSSL MRITLRNLEE VEFCVEDKPG IHFTAAPSMP PDVCRGMLCG 180
  181 FGAVCEPSVE DPGRASCVCK KNVCPAMVAP VCGSDASTYS NECELQRAQC NQQRRIRLLR 240
  241 QGPCPPKSCD SQPCLHGGTC QDLDSGKGFS CSCTAGRAGT VCEKVQLPSV PAFKGHSFLA 300
  301 FPTLRAYHTL RLALEFRALE TEGLLLYNGN ARGKDFLALA LLDGHVQFRF DTGSGPAVLT 360
  361 SLVPVEPGRW HRLELSRHWR QGTLSVDGEA PVVGESPSGT DGLNLDTKLY VGGLPEEQVA 420
  421 TVLDRTSVGI GLKGCIRMLD INNQQLELSD WQRAVVQSSG VGECGDHPCS PNPCHGGALC 480
  481 QALEAGVFLC QCPPGRFGPT CADEKNPCQP NPCHGSAPCH VLSRGGAKCA CPLGRSGSFC 540
  541 ETVLENAGSR PFLADFNGFS YLELKGLHTF ERDLGEKMAL EMVFLARGPS GLLLYNGQKT 600
  601 DGKGDFVSLA LHNRHLEFRY DLGKGAAIIR SKEPIALGTW VRVFLERNGR KGALQVGDGP 660
  661 RVLGESPVPH TMLNLKEPLY VGGAPDFSKL ARGAAVASGF DGAIQLVSLR GHQLLTQEHV 720
  721 LRAVDVAPFA GHPCTQAVDN PCLNGGSCIP REATYECLCP GGFSGLHCEK GIVEKSVGDL 780
  781 ETLAFDGRTY IEYLNAVTES EKALQSNHFE LSLRTEATQG LVLWIGKVGE RADYMALAIV 840
  841 DGHLQLSYDL GSQPVVLRST VKVNTNRWLR VRAHREHREG SLQVGNEAPV TGSSPLGATQ 900
  901 LDTDGALWLG GLQKLPVGQA LPKAYGTGFV GCLRDVVVGH RQLHLLEDAV TKPELRPCPT 960
  961 L

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle