YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|56971131
Protein type:	Globular with Signal Peptide
Type Confidence:	0.55
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAATSLVGIC RRASAFLKAA CSLVNPKDAA HSGCRSSLSL LHKNTPHVTS FLQCKLLHTT  60
   61 LSRKGLEEFF DDPKNWGEEK VKSGASWTCQ QLRNKSNEDL HKLWYALLKE RNMLLTLEQE 120
  121 AKRQRLPMPS PERLEKVVDS MDNVDKVVQE REDALRLLQT GQEKPRPGAW RRDIFGRIVW 180
  181 HKFKQWPIPW YLNKRYNRRR FFAMPYVDRF IRLRIEKHAR IEARKRSLQK KKEKILHAKF 240
  241 PHLSQERKSS SV

Type	Start	End	Confidence
Signal Peptide	1	15	0.55
N-region	1	6
H-region	7	12
C-region	13	15
Cleavage Site	15	16
Non-Cytoplasmic	16	252	0.98