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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|124486741, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.72
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAGAGSQHHP QGVAGGAVAG ASAVSPTAAG PGEDSSDSEA EQEGPQKLIR KVSTSGQMRT  60
   61 KTSIKEGQLL KQTSSFQRWK KRYFKLRGRT LYYAKDSKSL IFDEVDLSDA SVAEASTKNA 120
  121 NNSFTIITPF RRLMLCAENR KEMEVWISSL KSVQSREPYE VAQFNVEHFS GMHNWYACSH 180
  181 ARPTFCNVCR ESLSGVTSHG LSCEVCKFKA HKRCAVRATN NCKWTTLASI GKDIIEDEDG 240
  241 VAMPHQWLEG NLPVSAKCAV CDKTCGSVLR LQDWKCLWCK TMVHTACKDV YHPVCPLGQC 300
  301 KVSIIPPIAL NSTDSDGFCR ATFSFCVSPL LVFVNSKSGD NQGVKFLRRF KQLLNPAQVF 360
  361 DLMNGGPYLG LRLFQKFDNF RILVCGGDGS VGWVLSEIDK LNLHKQCQLG VLPLGTGNDL 420
  421 ARVLGWGGSY DDDTQLPQIL EKLERASTKM LDRWSIMTYE LKLPAKSSLL PEPVAATEEF 480
  481 YMTIYEDSVA NHLTKIVNSD EHAVVISSAK ILCETVKDFV AKVEKAQDRT LENTVVAEAV 540
  541 ASKCSVLNEK LEQLLQALHA DSQASRVPPG IGPAIPEEDT VESASDESLG ESKDQLVNDI 600
  601 GKPSSQKAVK PREIMLRANS LKKAVRQVIE EAEKVMDEPA VQPSEPVSPS CDYDTETDEA 660
  661 KEDDAKESLS AKTTSQSPDA QASCGHPQTD SVAGPAMATT KENLPVLNTR IICPGLRAGL 720
  721 AASIAGSSII NKMLLANIDP FGATPFIDPD LDSLDGYSEK CVMNNYFGIG LDAKISLEFN 780
  781 NKREEHPEKC RSRTKNLMWY GVLGTRELLQ RSYKNLEQRV QLECDGQYIP LPSLQGIAVL 840
  841 NIPSYAGGTN FWGGTKEDDI FAAPSFDDKI LEVVAVFDSV QMAVSRVIKL QHHRIAQCRT 900
  901 VKITIFGDEG VPVQVDGEAW VQPPGIIKIV HKNRAQMLTR DRAFESTLKS WEDKQKCDSG 960
  961 KPVLRTNLYI HPAPDLATEE VSQMRLCSQA AEELITRICD AATIHCLLEQ ELAHAVNACS1020
 1021 HALNKANPRF PESLTRDTAT EIAINVKALY NETEALLVGR VPLHLESPHE ERVSSALHSV1080
 1081 EMELQKLTEI PWLYYILRPS EDEEPPLDCT KRNNKSTVFR IVPKFKKEKA QKQKTSSQPG1140
 1141 PGDSESGSYE ANSPGN

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle