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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: TRPV5_MOUSE
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.50
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGAKTPWIQL QKLLNWWVRD QDWNQHVDQL HMLQQKSIWE SPLLRAAKEN DMCTLKKLQH  60
   61 DQNCDFRQRG ALGETALHVA ALYDNLDAAI MLMEAAPYLV TESTLCEPFV GQTALHIAVM 120
  121 NQNVNLVRAL LARGASASAR ATGSAFHRSS HNLIYYGEHP LSFAACVGSE EIVRLLIEHG 180
  181 ADIRAQDSLG NTVLHILVLQ PNKTFACQMY NLLLSYDGGD HLKSLELVPN NQGLTPFKLA 240
  241 GVEGNTVMFQ HLMQKRKRIQ WSFGPLTSSL YDLTEIDSWG EELSFLELVV SSKKKEARQI 300
  301 LKQTPVKELV SLKWKKYGQP YFCLLGALYI FYMVCFTTCC VYRPLKFRDA NRTHVRDNTI 360
  361 MEQKSLQEAY VTYQDKIRLV GELVTVIGAV IILLLEIPDI FRVGASRYFG QTVLGGPFHV 420
  421 IIITYASLVL LTMAMRLTNV NGEVVPMSMA LVLGWCSVMY FARGFQMLGP FTIMIQKMIF 480
  481 GDLLRFCWLM AMVILGFASA FYIIFQTEDP DNLGEFSDYP TAMFSTFELF LTIIDGPANY 540
  541 RVDLPFMYSV TYATFAIIAT LLMLNLFIAM MGDTHWRVAQ ERDELWRAQV VATTVMLERK 600
  601 MPRFLWPRSG ICGCEYGLGD RWFLRVEHHQ EQNPYRVLRY VEAFKSSDKE EVQEQLSEKQ 660
  661 PSGTETGTLA RGSVVLQTPP LSRTTSLSSN SHRGWEILRR NTLGHLNLGL DPGEGDGEEI 720
  721 YQF

YRC Informatics Platform - Version 3.0
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