YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|148669786, gi...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.87
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSDFEGYEQ DFAVLTAEIT SKIARVPRLP PDEKKQMVAN VEKQLEEARE LLEQMDLEVR  60
   61 EIPPQSRGMY SNRMRSYKQE MGKLETDFKR SRIAYSDEVR NELLGDAGNS SENQLIKLRE 120
  121 ERAHLLDNTE RLERSSRRLE AGYQIAVETE QIGQEMLENL SHDREKIQRA RDRLRDADAN 180
  181 LGKSSRILTG MLRRIIQNRI LLVILGIIVV IAILTAIAFF VKGH

Type	Start	End	Confidence
Cytoplasmic	1	199	0.94
Transmembrane Helix	200	221	0.94
Non-Cytoplasmic	222	224	0.87